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101 lines
2.4 KiB
101 lines
2.4 KiB
7 years ago
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# Copyright 1999-2017 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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inherit toolchain-funcs
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DESCRIPTION="Tools for DNA/RNA sequence database handling and phylogenetic analysis"
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HOMEPAGE="http://www.arb-home.de/"
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SRC_URI="http://download.arb-home.de/release/${P}/${P}-source.tgz -> ${P}.tgz"
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SLOT="0"
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LICENSE="arb"
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IUSE="debug +opengl test"
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KEYWORDS="~amd64 ~x86"
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CDEPEND="app-text/sablotron
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media-libs/libpng:=
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media-libs/tiff:=
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www-client/lynx
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x11-libs/libXaw
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x11-libs/libXpm
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x11-libs/motif:0
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opengl? (
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media-libs/glew:=
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media-libs/freeglut
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media-libs/mesa[motif]
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( media-libs/mesa x11-libs/libGLw ) ) )"
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DEPEND="${CDEPEND}
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sys-process/time
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x11-misc/makedepend"
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RDEPEND="${CDEPEND}
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sci-visualization/gnuplot"
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# Almost half of tests are broken with debug
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RESTRICT="debug? ( test )"
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PATCHES=(
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"${FILESDIR}"/${PN}-6.0.6-glapi.patch
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"${FILESDIR}"/${PN}-6.0.6-tc-flags.patch
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"${FILESDIR}"/${PN}-6.0.6-arb_install.patch
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)
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src_unpack() {
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default
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mv arbsrc* ${P} || die
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}
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src_prepare() {
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default
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cp config.makefile.template config.makefile
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mkdir "${S}"/patches.arb || die # Test script expects ${ARBHOME}/patches.arb to exist
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if use amd64; then
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sed -i -e 's@ARB_64 := 0@ARB_64 := 1@' config.makefile || die
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fi
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if use opengl; then
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sed -i -e 's@OPENGL := 0@OPENGL := 1@' config.makefile || die
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fi
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if use test; then
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sed -i -e 's@UNIT_TESTS := 0@UNIT_TESTS := 1@' config.makefile || die
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fi
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if use debug; then
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sed -i -e 's@DEBUG := 0@DEBUG := 1@' \
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-e 's@DEBUG_GRAPHICS := 0@DEBUG_GRAPHICS := 1@' config.makefile || die
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fi
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}
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src_compile() {
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emake ARBHOME="${S}" PATH="${S}/bin:${PATH}" LD_LIBRARY_PATH="${S}/lib:${LD_LIBRARY_PATH}" \
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CC="$(tc-getCC)" CXX="$(tc-getCXX)" build
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}
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src_test() {
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emake ARBHOME="${S}" PATH="${S}/bin:${PATH}" LD_LIBRARY_PATH="${S}/lib:${LD_LIBRARY_PATH}" \
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CC="$(tc-getCC)" CXX="$(tc-getCXX)" run_tests
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}
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src_install() {
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emake ARBHOME="${S}" PATH="${S}/bin:${PATH}" LD_LIBRARY_PATH="${S}/lib:${LD_LIBRARY_PATH}" \
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CC="$(tc-getCC)" CXX="$(tc-getCXX)" prepare_libdir
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"${S}"/util/arb_compress || die
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if use amd64; then
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mv arb.tgz arb.64.gentoo.tgz || die
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fi
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if use x86; then
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mv arb.tgz arb.32.gentoo.tgz || die
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fi
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ln -s arb.*.tgz arb.tgz || die
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ARBHOME="${D}/opt/arb" "${S}/arb_install.sh" || die
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cat <<- EOF > "${S}/99${PN}" || die
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ARBHOME=/opt/arb
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PATH=/opt/arb/bin
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LD_LIBRARY_PATH=/opt/arb/lib
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EOF
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doenvd "${S}/99${PN}"
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}
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