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40 lines
1.5 KiB
40 lines
1.5 KiB
12 years ago
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TMalign.f:
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This program is to identify the best alignment of two protein
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structures that gives the highest TM-score. Input structures must
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be in the PDB format. By default, TM-score is normalized by the
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second protein. Users can obtain a brief instruction by simply
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running the program without arguments. For comments/suggestions,
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please contact email: zhng@umich.edu.
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Reference to cite:
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Yang Zhang, Jeffrey Skolnick, Nucl. Acid Res. 2005 33: 2303-9
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Permission to use, copy, modify, and distribute this program for
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any purpose, with or without fee, is hereby granted, provided that
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the notices on the head, the reference information, and this
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copyright notice appear in all copies or substantial portions of
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the Software. It is provided "as is" without express or implied
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warranty.
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---
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TMscore.f:
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This program is to compare two protein structures and identify the
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best superposition that has the highest TM-score. Input structures
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must be in the PDB format. By default, TM-score is normalized by
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the second protein. Users can obtain a brief instruction by simply
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running the program without arguments. For comments/suggestions,
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please contact email: zhng@umich.edu.
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Reference:
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Yang Zhang, Jeffrey Skolnick, Proteins, 2004 57:702-10.
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Permission to use, copy, modify, and distribute this program for
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any purpose, with or without fee, is hereby granted, provided that
|
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|
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the notices on the head, the reference information, and this
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|
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copyright notice appear in all copies or substantial portions of
|
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|
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the Software. It is provided "as is" without express or implied
|
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|
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warranty.
|