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43 lines
1012 B
43 lines
1012 B
# Copyright 1999-2020 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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inherit toolchain-funcs
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DESCRIPTION="An MPI implemention of the ClustalW general purpose multiple alignment algorithm"
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HOMEPAGE="http://www.bii.a-star.edu.sg/achievements/applications/clustalw/index.php"
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SRC_URI="http://web.bii.a-star.edu.sg/~kuobin/${PN}/${P}.tar.gz"
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LICENSE="public-domain"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="mpi-njtree static-pairalign"
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DEPEND="virtual/mpi"
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RDEPEND="${DEPEND}"
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PATCHES=(
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"${FILESDIR}"/${P}-makefile.patch
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"${FILESDIR}"/${P}-fno-common.patch
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)
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src_prepare() {
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default
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if use mpi-njtree; then
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sed -e "s/TREES_FLAG/#TREES_FLAG/" -i Makefile || \
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die "Failed to configure MPI code for NJ trees"
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fi
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if use static-pairalign; then
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sed -e "s/DDYNAMIC_SCHEDULING/DSTATIC_SCHEDULING/" -i Makefile || \
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die "Failed to configure static scheduling for pair alignments"
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fi
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}
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src_install() {
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dobin clustalw-mpi
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newdoc README.clustalw-mpi README
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}
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