You can not select more than 25 topics
Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
107 lines
2.6 KiB
107 lines
2.6 KiB
# Copyright 1999-2012 Gentoo Foundation
|
|
# Distributed under the terms of the GNU General Public License v2
|
|
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.3.1_pre3925-r1.ebuild,v 1.6 2012/06/04 06:02:01 xmw Exp $
|
|
|
|
EAPI="3"
|
|
|
|
PYTHON_DEPEND="2:2.6"
|
|
SUPPORT_PYTHON_ABIS="1"
|
|
RESTRICT_PYTHON_ABIS="2.4 2.5 3.* *-jython 2.7-pypy-*"
|
|
PYTHON_USE_WITH="tk"
|
|
PYTHON_MODNAME="${PN} chempy pmg_tk pmg_wx"
|
|
REV="3925"
|
|
|
|
inherit eutils distutils prefix
|
|
|
|
DESCRIPTION="A Python-extensible molecular graphics system"
|
|
HOMEPAGE="http://pymol.sourceforge.net/"
|
|
#SRC_URI="http://pymol.svn.sourceforge.net/viewvc/pymol/trunk/pymol.tar.gz?view=tar&pathrev=${REV} -> ${P}.tar.gz"
|
|
SRC_URI="mirror://gentoo/${PF}.tar.gz"
|
|
|
|
LICENSE="PSF-2.2"
|
|
SLOT="0"
|
|
KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux"
|
|
IUSE="apbs numpy shaders vmd"
|
|
|
|
DEPEND="
|
|
dev-python/numpy
|
|
dev-python/pmw
|
|
media-libs/freetype:2
|
|
media-libs/libpng
|
|
media-video/mpeg-tools
|
|
sys-libs/zlib
|
|
media-libs/freeglut
|
|
apbs? (
|
|
dev-libs/maloc
|
|
sci-chemistry/apbs
|
|
sci-chemistry/pdb2pqr
|
|
sci-chemistry/pymol-apbs-plugin
|
|
)"
|
|
RDEPEND="${DEPEND}"
|
|
|
|
S="${WORKDIR}"/${PN}
|
|
|
|
src_prepare() {
|
|
epatch "${FILESDIR}"/${PN}-1.2.2-data-path.patch
|
|
|
|
epatch "${FILESDIR}"/${PN}-1.2.2-prefix.patch && \
|
|
eprefixify setup.py
|
|
|
|
# Turn off splash screen. Please do make a project contribution
|
|
# if you are able though. #299020
|
|
epatch "${FILESDIR}"/1.2.1/nosplash-gentoo.patch
|
|
|
|
# Respect CFLAGS
|
|
sed -i \
|
|
-e "s:\(ext_comp_args=\).*:\1[]:g" \
|
|
"${S}"/setup.py || die "Failed running sed on setup.py"
|
|
|
|
use shaders && epatch "${FILESDIR}"/${PN}-1.2.2-shaders.patch
|
|
|
|
use vmd && epatch "${FILESDIR}"/${PN}-1.3.0-vmd.patch
|
|
|
|
use numpy && \
|
|
sed \
|
|
-e '/PYMOL_NUMPY/s:^#::g' \
|
|
-i setup.py
|
|
|
|
rm ./modules/pmg_tk/startup/apbs_tools.py || die
|
|
|
|
# python 3.* fix
|
|
# sed '452,465d' -i setup.py
|
|
distutils_src_prepare
|
|
}
|
|
|
|
src_configure() {
|
|
:
|
|
}
|
|
|
|
src_install() {
|
|
distutils_src_install
|
|
|
|
# These environment variables should not go in the wrapper script, or else
|
|
# it will be impossible to use the PyMOL libraries from Python.
|
|
cat >> "${T}"/20pymol <<- EOF
|
|
PYMOL_PATH="${EPREFIX}/$(python_get_sitedir -f)/${PN}"
|
|
PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
|
|
PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
|
|
EOF
|
|
|
|
doenvd "${T}"/20pymol || die "Failed to install env.d file."
|
|
|
|
cat >> "${T}"/pymol <<- EOF
|
|
#!/bin/sh
|
|
$(PYTHON -f) -O \${PYMOL_PATH}/__init__.py \$*
|
|
EOF
|
|
|
|
dobin "${T}"/pymol || die "Failed to install wrapper."
|
|
|
|
insinto /usr/share/pymol
|
|
doins -r test data scripts || die "no shared data"
|
|
|
|
insinto /usr/share/pymol/examples
|
|
doins -r examples || die "Failed to install docs."
|
|
|
|
dodoc DEVELOPERS README || die "Failed to install docs."
|
|
}
|