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94 lines
2.5 KiB
94 lines
2.5 KiB
# Copyright 1999-2017 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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DIST_AUTHOR=LDS
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DIST_VERSION=1.17
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DIST_EXAMPLES=("eg/*")
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inherit perl-module
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DESCRIPTION="Interface to Distributed Annotation System"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE=""
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DEPEND=">=virtual/perl-IO-Compress-1.0
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sci-biology/bioperl
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>=dev-perl/HTML-Parser-3
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>=dev-perl/libwww-perl-5
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>=virtual/perl-MIME-Base64-2.12"
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RDEPEND="${DEPEND}"
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optdep_notice() {
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local i
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elog "This package has several modules which may require additional dependencies"
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elog "to use. However, it is up to you to install them separately if you need this"
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elog "optional functionality:"
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elog
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i="$(if has_version 'dev-perl/CGI'; then echo '[I]'; else echo '[ ]'; fi)"
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elog " $i dev-perl/CGI"
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elog " - Running a reference DAS server driven by an AGP File via"
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elog " Bio::Das::AGPServer::Daemon"
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if use test; then
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elog
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elog "This module will perform additional tests if these dependencies are"
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elog "pre-installed"
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fi
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}
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src_test() {
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local MODULES=(
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"Bio::Das ${DIST_VERSION}"
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"Bio::Das::AGPServer::Config 1.0"
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"Bio::Das::AGPServer::Parser"
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"Bio::Das::AGPServer::SQLStorage"
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"Bio::Das::AGPServer::SQLStorage::CSV::DB"
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"Bio::Das::AGPServer::SQLStorage::MySQL::DB"
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"Bio::Das::DSN"
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"Bio::Das::Feature 0.91"
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"Bio::Das::FeatureIterator 0.01"
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"Bio::Das::HTTP::Fetch 1.11"
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"Bio::Das::Map 1.01"
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"Bio::Das::Request"
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"Bio::Das::Request::Dnas"
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"Bio::Das::Request::Dsn"
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"Bio::Das::Request::Entry_points"
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"Bio::Das::Request::Feature2Segments"
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"Bio::Das::Request::Features"
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"Bio::Das::Request::Sequences"
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"Bio::Das::Request::Stylesheet"
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"Bio::Das::Request::Types"
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"Bio::Das::Segment 0.91"
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"Bio::Das::Stylesheet 1.00"
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"Bio::Das::Type"
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"Bio::Das::TypeHandler"
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"Bio::Das::Util 0.01"
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)
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has_version dev-perl/CGI && MODULES+=(
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"Bio::Das::AGPServer::Daemon"
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)
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local failed=()
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for dep in "${MODULES[@]}"; do
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ebegin "Compile testing ${dep}"
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perl -Mblib="${S}" -M"${dep} ()" -e1
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eend $? || failed+=( "$dep" )
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done
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if [[ ${failed[@]} ]]; then
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echo
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eerror "One or more modules failed compile:";
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for dep in "${failed[@]}"; do
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eerror " ${dep}"
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done
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die "Failing due to module compilation errors";
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fi
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if has "network" ${DIST_TEST_OVERRIDE:-${DIST_TEST:-do parallel}}; then
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perl-module_src_test
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else
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ewarn "Functional parts of these tests require network access"
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ewarn "For details, see:"
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ewarn "https://wiki.gentoo.org/wiki/Project:Perl/maint-notes/dev-perl/Bio-Das"
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fi
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}
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