42 lines
910 B
Bash
42 lines
910 B
Bash
# Copyright 1999-2015 Gentoo Foundation
|
|
# Distributed under the terms of the GNU General Public License v2
|
|
# $Id$
|
|
|
|
EAPI=5
|
|
|
|
DESCRIPTION="Shotgun assembly and alignment utilities"
|
|
HOMEPAGE="http://www.phrap.org/"
|
|
SRC_URI="phrap-${PV}-distrib.tar.gz"
|
|
|
|
LICENSE="phrap"
|
|
SLOT="0"
|
|
KEYWORDS="~amd64 ~x86"
|
|
IUSE=""
|
|
|
|
DEPEND=""
|
|
RDEPEND="
|
|
dev-lang/perl
|
|
dev-perl/perl-tk"
|
|
|
|
S="${WORKDIR}"
|
|
|
|
RESTRICT="fetch"
|
|
|
|
pkg_nofetch() {
|
|
einfo "Please visit http://www.phrap.org/phredphrapconsed.html and obtain the file"
|
|
einfo "\"distrib.tar.gz\", then rename it to \"phrap-${PV}-distrib.tar.gz\""
|
|
einfo "and put it in ${DISTDIR}"
|
|
}
|
|
|
|
src_prepare() {
|
|
sed -i 's/CFLAGS=/#CFLAGS=/' makefile || die
|
|
sed -i 's|#!/usr/local/bin/perl|#!/usr/bin/env perl|' phrapview || die
|
|
}
|
|
|
|
src_install() {
|
|
dobin cross_match loco phrap phrapview swat
|
|
newbin cluster cluster_phrap
|
|
for i in {general,phrap,swat}.doc ; do
|
|
newdoc ${i} ${i}.txt
|
|
done
|
|
}
|