47 lines
1 KiB
Bash
47 lines
1 KiB
Bash
# Copyright 1999-2014 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/infernal/infernal-1.0.2-r1.ebuild,v 1.5 2014/07/06 11:34:46 jlec Exp $
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EAPI=4
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inherit eutils
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DESCRIPTION="Inference of RNA alignments"
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HOMEPAGE="http://infernal.janelia.org/"
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SRC_URI="ftp://selab.janelia.org/pub/software/${PN}/${P}.tar.gz"
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LICENSE="GPL-3"
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SLOT="0"
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IUSE="mpi"
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KEYWORDS="amd64 x86"
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DEPEND="mpi? ( virtual/mpi )"
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RDEPEND="${DEPEND}"
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src_prepare() {
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epatch \
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"${FILESDIR}"/${P}-parallel-build.patch \
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"${FILESDIR}"/${P}-overflows.patch \
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"${FILESDIR}"/${P}-perl-5.16-2.patch \
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"${FILESDIR}"/${P}-ldflags.patch
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}
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src_configure() {
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econf \
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--prefix="${D}/usr" \
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$(use_enable mpi)
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}
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src_install() {
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default
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pushd documentation/manpages > /dev/null
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for i in *;
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do newman ${i} ${i/.man/.1}
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done
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popd > /dev/null
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insinto /usr/share/${PN}
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doins -r benchmarks tutorial intro matrices
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dodoc 00README* Userguide.pdf documentation/release-notes/*
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}
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