47 lines
1.2 KiB
Bash
47 lines
1.2 KiB
Bash
# Copyright 1999-2015 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=5
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inherit cmake-utils
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DESCRIPTION="Fast inference of approximately-maximum-likelihood phylogenetic trees"
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HOMEPAGE="http://www.microbesonline.org/fasttree/"
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SRC_URI="
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http://www.microbesonline.org/fasttree/FastTree-${PV}.c
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http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-${PV}.c
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http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-${PV}.tar.gz
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"
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LICENSE="GPL-2"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="double-precision openmp cpu_flags_x86_sse3"
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REQUIRED_USE="?? ( double-precision cpu_flags_x86_sse3 )"
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DOCS=( README )
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PATCHES=( "${FILESDIR}"/${P}-format-security.patch )
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src_unpack() {
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mkdir "${S}" || die
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cd "${S}" || die
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unpack ${A}
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cp "${DISTDIR}"/{FastTreeUPGMA-${PV}.c,FastTree-${PV}.c} . || die
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}
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src_prepare() {
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cp "${FILESDIR}"/CMakeLists.txt . || die
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cmake-utils_src_prepare
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}
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src_configure() {
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local mycmakeargs=(
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-DVERSION="${PV}"
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$(cmake-utils_use_has cpu_flags_x86_sse3 sse3)
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$(cmake-utils_use_use openmp)
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$(cmake-utils_use_use double-precision double)
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)
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cmake-utils_src_configure
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}
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