50 lines
1.2 KiB
Bash
50 lines
1.2 KiB
Bash
# Copyright 1999-2012 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/gibbs/gibbs-3.1.ebuild,v 1.6 2012/04/26 16:17:09 jlec Exp $
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EAPI=4
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AUTOTOOLS_AUTORECONF=yes
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inherit autotools-utils multilib
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DESCRIPTION="Identify motifs, conserved regions, in DNA or protein sequences"
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HOMEPAGE="http://bayesweb.wadsworth.org/gibbs/gibbs.html"
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SRC_URI="mirror://gentoo/gibbs-${PV}.tar.gz"
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LICENSE="GPL-2"
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SLOT="0"
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IUSE="mpi"
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KEYWORDS="amd64 x86"
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DEPEND="
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mpi? (
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virtual/mpi
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sys-cluster/mpe2 )"
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RDEPEND="${DEPEND}"
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src_prepare() {
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sed \
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-e 's/CFLAGS="$OPTFLAGS/CFLAGS="$CFLAGS $OPTFLAGS/' \
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-e 's/-Werror//' \
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-i configure.in || die
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autotools-utils_src_prepare
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}
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src_configure() {
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if use mpi; then export CC=mpicc; fi
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local myeconfargs=( $(use_enable mpi) )
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autotools-utils_src_configure
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}
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src_install() {
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autotools-utils_src_install
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exeinto /usr/$(get_libdir)/${PN}
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doexe *.pl
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dodoc README ChangeLog
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}
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pkg_postinst() {
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einfo "Supplementary Perl scripts for Gibbs have been installed into /usr/$(get_libdir)/${PN}."
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einfo "These scripts require installation of sci-biology/bioperl."
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}
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