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34 lines
773 B
34 lines
773 B
# Copyright 1999-2020 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=7
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PYTHON_COMPAT=( python3_{7..9} )
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inherit distutils-r1
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DESCRIPTION="Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files"
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HOMEPAGE="https://htseq.readthedocs.io/"
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if [[ ${PV} == *9999 ]]; then
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inherit git-r3
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EGIT_REPO_URI="https://github.com/htseq/htseq.git"
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else
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SRC_URI="https://github.com/htseq/htseq/archive/release_${PV}.tar.gz -> ${P}.tar.gz"
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S="${WORKDIR}"/htseq-release_${PV}
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KEYWORDS="~amd64"
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fi
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LICENSE="GPL-3+"
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SLOT="0"
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RDEPEND="
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/matplotlib[${PYTHON_USEDEP}]
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sci-biology/pysam[${PYTHON_USEDEP}]"
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DEPEND="${RDEPEND}"
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BDEPEND="
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>=dev-lang/swig-3.0.8
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dev-python/cython[${PYTHON_USEDEP}]"
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