gentoo-full-overlay/sci-biology/bamtools/bamtools-2.5.1.ebuild

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# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
inherit cmake
DESCRIPTION="A programmer's API and an end-user's toolkit for handling BAM files"
HOMEPAGE="https://github.com/pezmaster31/bamtools"
if [[ ${PV} == *9999 ]]; then
inherit git-r3
EGIT_REPO_URI="https://github.com/pezmaster31/bamtools.git"
else
SRC_URI="https://github.com/pezmaster31/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64 ~x86"
fi
LICENSE="MIT"
SLOT="0/${PV}" # no stable ABI yet
RDEPEND="
>=dev-libs/jsoncpp-1.8.0:=
sys-libs/zlib:="
DEPEND="${RDEPEND}"
BDEPEND="virtual/pkgconfig"
src_prepare() {
# delete bundled libs, just to be safe
rm -rf src/third_party/{gtest-1.6.0,jsoncpp} || die
cmake_src_prepare
}