13 lines
873 B
Text
13 lines
873 B
Text
DEFINED_PHASES=compile configure install prepare test
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DEPEND=dev-libs/boost bam? ( sci-biology/samtools ) !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.13:1.13 >=sys-devel/automake-1.14:1.14 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
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DESCRIPTION=A fast splice junction mapper for RNA-Seq reads
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EAPI=4
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HOMEPAGE=http://tophat.cbcb.umd.edu/
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IUSE=+bam debug
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KEYWORDS=~amd64 ~x86
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LICENSE=Artistic
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RDEPEND=dev-libs/boost bam? ( sci-biology/samtools ) sci-biology/bowtie
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SLOT=0
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SRC_URI=http://tophat.cbcb.umd.edu/downloads/tophat-2.0.0.tar.gz
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_eclasses_=autotools c118b9a8e93bfef124f2d7a2fe56a95e autotools-utils 3727db64c7b960903d5033280f108080 eutils 6faef4c127028ccbba3a11400d24ae34 libtool 52d0e17251d04645ffaa61bfdd858944 multilib 3bf24e6abb9b76d9f6c20600f0b716bf toolchain-funcs 0dfbfa13f57c6184f4728d12ac002aac
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_md5_=a3df878309c9dce16ef49799ba0d8b43
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