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87 lines
1.9 KiB
87 lines
1.9 KiB
# Copyright 1999-2012 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/tinker/tinker-5.1.09.ebuild,v 1.7 2012/10/19 10:30:49 jlec Exp $
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EAPI="2"
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inherit eutils fortran-2 java-pkg-opt-2 toolchain-funcs
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DESCRIPTION="Molecular modeling package that includes force fields, such as AMBER and CHARMM"
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HOMEPAGE="http://dasher.wustl.edu/tinker/"
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SRC_URI="http://dasher.wustl.edu/${PN}/downloads/${P}.tar.gz"
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SLOT="0"
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LICENSE="Tinker"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE="examples"
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DEPEND="
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>=virtual/jdk-1.6"
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RDEPEND="
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dev-libs/maloc
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!dev-util/diffuse
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>=virtual/jre-1.6"
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RESTRICT="mirror"
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S="${WORKDIR}"/tinker/source
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pkg_setup() {
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fortran-2_pkg_setup
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java-pkg-opt-2_pkg_setup
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}
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src_prepare() {
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cd ..
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epatch "${FILESDIR}"/${PV}-Makefile.patch
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}
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src_compile() {
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local javalib=
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for i in $(java-config -g LDPATH | sed 's|:| |g'); do
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[[ -f ${i}/libjvm.so ]] && javalib=${i}
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done
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emake -e \
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-f ../make/Makefile \
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F77="$(tc-getFC)" \
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CC="$(tc-getCC) -c" \
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F77FLAGS=-c \
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OPTFLAGS="${FFLAGS}" \
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LINKFLAGS="${LDFLAGS} -Wl,-rpath ${javalib}" \
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INCLUDEDIR="$(java-pkg_get-jni-cflags) -I${EPREFIX}/usr/include" \
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LIBS=" -lmaloc -L${javalib} -ljvm" \
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all || die
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mkdir "${S}"/../bin || die
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emake \
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-f ../make/Makefile \
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BINDIR="${S}"/../bin \
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rename || die
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}
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src_test() {
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cd "${WORKDIR}"/tinker/test/
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for test in *.run; do
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einfo "Testing ${test} ..."
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bash ${test} || die
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done
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}
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src_install() {
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dobin "${WORKDIR}"/${PN}/perl/mdavg "${WORKDIR}"/${PN}/bin/* || die
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insinto /usr/share/${PN}/
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doins -r "${WORKDIR}"/${PN}/params || die
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dodoc \
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"${WORKDIR}"/${PN}/doc/{*.txt,announce/release-*,*.pdf,0README} || die
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if use examples; then
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insinto /usr/share/${P}
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doins -r "${WORKDIR}"/${PN}/example || die
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doins -r "${WORKDIR}"/${PN}/test || die
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fi
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}
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