13 lines
842 B
Groff
13 lines
842 B
Groff
DEFINED_PHASES=compile configure install prepare test
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DEPEND=dev-libs/boost bam? ( sci-biology/samtools ) !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
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DESCRIPTION=A fast splice junction mapper for RNA-Seq reads
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EAPI=4
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HOMEPAGE=http://tophat.cbcb.umd.edu/
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IUSE=+bam debug
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KEYWORDS=~amd64 ~x86
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LICENSE=Artistic
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RDEPEND=dev-libs/boost bam? ( sci-biology/samtools ) sci-biology/bowtie
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SLOT=0
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SRC_URI=http://tophat.cbcb.umd.edu/downloads/tophat-2.0.2.tar.gz
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_eclasses_=autotools 8056957fdccf2b3cd6e282a4b4551d1a autotools-utils 0bf099a6e3dfeaf20a7a94504d8dd896 eutils 351a78113be5b393c09a2c948701ad36 libtool 7f78cd7d403808a350c9ae23f5821fb4 multilib df4e4d5cfd3d137d0c248e1991c0e4d6 toolchain-funcs 4b8d3388c0a6e798504e20ba30b49361
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_md5_=7b1391e37d11a72f3f41e510b41399f0
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