37 lines
874 B
Bash
37 lines
874 B
Bash
# Copyright 1999-2012 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/cufflinks/cufflinks-1.3.0.ebuild,v 1.1 2012/02/05 03:56:55 weaver Exp $
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EAPI=4
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inherit flag-o-matic autotools
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DESCRIPTION="Transcript assembly, differential expression, and differential regulation for RNA-Seq"
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HOMEPAGE="http://cufflinks.cbcb.umd.edu/"
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SRC_URI="http://cufflinks.cbcb.umd.edu/downloads/${P}.tar.gz"
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LICENSE="Artistic"
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SLOT="0"
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IUSE=""
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KEYWORDS="~amd64 ~x86"
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DEPEND="sci-biology/samtools
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dev-libs/boost:1.46"
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RDEPEND="${DEPEND}"
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MAKEOPTS="${MAKEOPTS} -j1"
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src_prepare() {
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filter-ldflags -Wl,--as-needed
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eautoreconf
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}
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src_configure() {
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econf \
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--with-boost-libdir="${EPREFIX}/usr/$(get_libdir)/boost-1_46" || die
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}
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src_install() {
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emake DESTDIR="${D}" install || die
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dodoc README AUTHORS
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}
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