51 lines
1.1 KiB
Bash
51 lines
1.1 KiB
Bash
# Copyright 1999-2010 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/hmmer/hmmer-2.3.2-r2.ebuild,v 1.8 2010/07/18 10:20:59 xarthisius Exp $
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DESCRIPTION="Sequence analysis using profile hidden Markov models"
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LICENSE="GPL-2"
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HOMEPAGE="http://hmmer.janelia.org/"
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SRC_URI="ftp://ftp.genetics.wustl.edu/pub/eddy/${PN}/${PV}/${P}.tar.gz"
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SLOT="0"
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IUSE="pvm threads"
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KEYWORDS="~alpha amd64 ~ia64 ~ppc ppc64 ~sparc x86"
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DEPEND="pvm? ( sys-cluster/pvm )"
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src_compile() {
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econf \
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--host=${CHOST} \
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--prefix="${D}"/usr \
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--exec_prefix="${D}"/usr \
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--mandir="${D}"/usr/share/man \
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--enable-lfs \
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$(use_enable pvm) \
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$(use_enable threads) || die
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emake || die
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}
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src_install() {
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einstall || die
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cd src
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dolib libhmmer.a
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insinto /usr/include/hmmer
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doins *.h
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cd ../squid
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dobin afetch alistat compalign compstruct revcomp seqstat seqsplit sfetch shuffle sreformat sindex weight translate
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dolib libsquid.a
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insinto /usr/include/hmmer
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doins *.h
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cd ..
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dodoc NOTES
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newdoc 00README README
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insinto /usr/share/doc/${PF}
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doins Userguide.pdf
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}
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src_test() {
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make check
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}
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