51 lines
1.2 KiB
Bash
51 lines
1.2 KiB
Bash
# Copyright 1999-2011 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/psipred/psipred-3.2.ebuild,v 1.2 2011/05/24 12:18:04 jlec Exp $
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EAPI=3
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inherit eutils prefix toolchain-funcs versionator
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MY_P="${PN}$(delete_all_version_separators)"
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DESCRIPTION="Protein Secondary Structure Prediction"
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HOMEPAGE="http://bioinf.cs.ucl.ac.uk/psipred/"
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SRC_URI="http://bioinf.cs.ucl.ac.uk/downloads/${PN}/${MY_P}.tar.gz"
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LICENSE="psipred"
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SLOT="0"
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KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
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IUSE=""
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RDEPEND="
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sci-biology/ncbi-tools
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sci-biology/ncbi-tools++"
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DEPEND=""
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S="${WORKDIR}"
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src_prepare() {
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rm -f bin/*
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epatch \
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"${FILESDIR}"/3.1-Makefile.patch \
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"${FILESDIR}"/3.1-path.patch \
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"${FILESDIR}"/${PV}-fgets.patch
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eprefixify runpsipred*
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}
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src_compile() {
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emake -C src CC=$(tc-getCC) || die "emake failed"
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}
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src_install() {
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emake -C src DESTDIR="${D}" install || die "installation failed"
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dobin runpsipred* bin/* BLAST+/runpsipred* || die
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insinto /usr/share/${PN}
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doins -r data || die "failed to install data"
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dodoc README || die "nothing to read"
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}
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pkg_postinst() {
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elog "Please use the update_blastdb.pl in order to"
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elog "maintain your own local blastdb"
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}
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