36 lines
832 B
Bash
36 lines
832 B
Bash
# Copyright 1999-2012 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/gmap/gmap-2012.07.20.ebuild,v 1.1 2012/10/05 16:50:34 weaver Exp $
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EAPI=4
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MY_PV=${PV//./-}
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DESCRIPTION="A Genomic Mapping and Alignment Program for mRNA and EST Sequences"
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HOMEPAGE="http://research-pub.gene.com/gmap/"
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SRC_URI="http://research-pub.gene.com/gmap/src/gmap-gsnap-${MY_PV}.tar.gz"
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LICENSE="gmap"
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SLOT="0"
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IUSE="+samtools +goby"
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KEYWORDS="~amd64 ~x86"
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DEPEND="samtools? ( sci-biology/samtools )
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goby? ( sci-biology/goby-cpp )"
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RDEPEND="${DEPEND}"
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S="${WORKDIR}/gmap-${MY_PV}"
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src_configure() {
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econf $(use_with samtools) \
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$(use_with goby goby /usr)
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}
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src_install() {
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einstall || die
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dodoc AUTHORS ChangeLog README
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}
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src_test() {
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emake check || die
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}
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