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51 lines
966 B
51 lines
966 B
8 years ago
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# Copyright 1999-2016 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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inherit toolchain-funcs
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DESCRIPTION="A base caller for Sanger DNA sequencing"
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HOMEPAGE="http://phrap.org/phredphrapconsed.html"
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SRC_URI="phred-dist-071220.b-acd.tar.gz"
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LICENSE="phrap"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE=""
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DEPEND=""
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RDEPEND=""
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S="${WORKDIR}"
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RESTRICT="fetch"
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PATCHES=(
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"${FILESDIR}/${PN}-071220-fix-build-system.patch"
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"${FILESDIR}/${PN}-071220-fix-qa.patch"
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)
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pkg_nofetch() {
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einfo "Please visit ${HOMEPAGE} and obtain the file"
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einfo "${SRC_URI}, then place it in ${DISTDIR}"
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}
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src_compile() {
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emake CC="$(tc-getCC)" \
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CFLAGS="${CFLAGS}" \
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LDFLAGS="${LDFLAGS}"
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}
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src_install() {
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dobin phred daev
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insinto /usr/share/${PN}
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doins phredpar.dat
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echo "PHRED_PARAMETER_FILE=${EPREFIX}/usr/share/${PN}/phredpar.dat" > 99phred || die
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doenvd 99phred
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newdoc DAEV.DOC DAEV.DOC.txt
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newdoc PHRED.DOC PHRED.DOC.txt
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}
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