gentoo-overlay/sci-biology/HTSeq/HTSeq-0.9.1.ebuild

# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=6

PYTHON_COMPAT=( python2_7 python3_{4,5,6} )

inherit distutils-r1

DESCRIPTION="Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files"
HOMEPAGE="https://htseq.readthedocs.io/"

if [[ ${PV} == *9999 ]]; then
	inherit git-r3
	EGIT_REPO_URI="https://github.com/simon-anders/htseq.git"
else
	SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
	KEYWORDS="~amd64"
fi

LICENSE="GPL-3+"
SLOT="0"

RDEPEND="
	dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	sci-biology/pysam[${PYTHON_USEDEP}]"
DEPEND="
	${RDEPEND}
	>=dev-lang/swig-3.0.8
	dev-python/cython[${PYTHON_USEDEP}]"
Sync with portage [Sat Nov 18 20:52:08 MSK 2017]. 7 years ago			`# Copyright 1999-2017 Gentoo Foundation`
			`# Distributed under the terms of the GNU General Public License v2`

			`EAPI=6`

			`PYTHON_COMPAT=( python2_7 python3_{4,5,6} )`

			`inherit distutils-r1`

			`DESCRIPTION="Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files"`
			`HOMEPAGE="https://htseq.readthedocs.io/"`

			`if [[ ${PV} == *9999 ]]; then`
			`inherit git-r3`
			`EGIT_REPO_URI="https://github.com/simon-anders/htseq.git"`
			`else`
			`SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"`
			`KEYWORDS="~amd64"`
			`fi`

			`LICENSE="GPL-3+"`
			`SLOT="0"`

			`RDEPEND="`
			`dev-python/numpy[${PYTHON_USEDEP}]`
			`dev-python/matplotlib[${PYTHON_USEDEP}]`
			`sci-biology/pysam[${PYTHON_USEDEP}]"`
			`DEPEND="`
			`${RDEPEND}`
			`>=dev-lang/swig-3.0.8`
			`dev-python/cython[${PYTHON_USEDEP}]"`