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# Copyright 1999-2012 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-2.3.1.ebuild,v 1.5 2012/12/16 19:51:49 ago Exp $
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EAPI=4
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inherit eutils toolchain-funcs
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DESCRIPTION="Primer Design for PCR reactions"
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HOMEPAGE="http://primer3.sourceforge.net/"
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SRC_URI="mirror://sourceforge/${PN}/${PV}/${P}.tar.gz"
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SLOT="0"
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LICENSE="GPL-2"
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IUSE=""
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KEYWORDS="amd64 ppc ~ppc64 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
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DEPEND="dev-lang/perl"
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RDEPEND=""
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src_prepare() {
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epatch "${FILESDIR}"/${PN}-2.3.4-buildsystem.patch
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if [[ ${CHOST} == *-darwin* ]]; then
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sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile || die
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fi
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tc-export CC CXX AR RANLIB
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}
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src_compile() {
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emake -C src
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}
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src_test () {
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emake -C test | tee "${T}"/test.log
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grep -q "\[FAILED\]" && die "test failed. See "${T}"/test.log"
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}
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src_install () {
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dobin src/{long_seq_tm_test,ntdpal,oligotm,primer3_core}
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dodoc src/release_notes.txt example
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insinto /opt/primer3_config
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doins -r src/primer3_config/* primer3*settings.txt
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dohtml primer3_manual.htm
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}
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