DEFINED_PHASES=compile configure install prepare test
DEPEND=|| ( ( >=sci-biology/samtools-0.1.18 sci-libs/htslib ) <sci-biology/samtools-1 ) >=dev-libs/boost-1.47.0:= dev-cpp/eigen:3 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.13:1.13 >=sys-devel/automake-1.14:1.14 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
DESCRIPTION=Transcript assembly, differential expression, and differential regulation for RNA-Seq
EAPI=5
HOMEPAGE=http://cufflinks.cbcb.umd.edu/
IUSE=debug
KEYWORDS=~amd64 ~x86
LICENSE=Artistic
RDEPEND=|| ( ( >=sci-biology/samtools-0.1.18 sci-libs/htslib ) <sci-biology/samtools-1 ) >=dev-libs/boost-1.47.0:= dev-cpp/eigen:3
SLOT=0
SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz
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_md5_=14ea7ff41ba0a8c934eec39e9d37ce87