DEFINED_PHASES=compile configure install prepare test
DEPEND=>=sci-biology/samtools-0.1.18 <sci-biology/samtools-1 >=dev-libs/boost-1.47.0:= <dev-libs/boost-1.56.0:= dev-cpp/eigen:3
DESCRIPTION=Transcript assembly, differential expression, and differential regulation for RNA-Seq
EAPI=5
HOMEPAGE=http://cufflinks.cbcb.umd.edu/
IUSE=debug
KEYWORDS=~amd64 ~x86
LICENSE=Artistic
RDEPEND=>=sci-biology/samtools-0.1.18 <sci-biology/samtools-1 >=dev-libs/boost-1.47.0:= <dev-libs/boost-1.56.0:= dev-cpp/eigen:3
SLOT=0
SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz
_eclasses_=autotools	07e71b3b5690738ef7e8bc097077e00c	autotools-utils	419811142edf3516b0d0cf1a254d93cb	eutils	d9bd2ddd85a58e470b49ca997e255a4c	flag-o-matic	85dc1eac3c64d8141374490ed64122e5	libtool	b75230758539a7da029e24afdb693960	multilib	3972ca401cf7dbb430df9995f5d8d580	toolchain-funcs	7a212e5e01adfa4805c9978366e6ee85
_md5_=e79f31bdb541fd2b2912eb735c40c67a