31 lines
715 B
Bash
31 lines
715 B
Bash
# Copyright 1999-2017 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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EAPI=6
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PYTHON_COMPAT=( python2_7 python3_{4,5,6} )
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inherit distutils-r1
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DESCRIPTION="Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files"
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HOMEPAGE="https://htseq.readthedocs.io/"
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if [[ ${PV} == *9999 ]]; then
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inherit git-r3
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EGIT_REPO_URI="https://github.com/simon-anders/htseq.git"
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else
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SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
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KEYWORDS="~amd64"
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fi
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LICENSE="GPL-3+"
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SLOT="0"
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RDEPEND="
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/matplotlib[${PYTHON_USEDEP}]
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sci-biology/pysam[${PYTHON_USEDEP}]"
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DEPEND="
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${RDEPEND}
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>=dev-lang/swig-3.0.8
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dev-python/cython[${PYTHON_USEDEP}]"
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