gentoo-overlay/dev-java/colt/files/colt-1.2.0-benchmark-no-deprecation.patch

--- src/cern/colt/matrix/impl/BenchmarkMatrix2D.java	2005-12-13 00:57:28.000000000 -0600
+++ src/cern/colt/matrix/impl/BenchmarkMatrix2D.java	2005-12-13 01:20:09.000000000 -0600
@@ -331,6 +331,8 @@
 	cern.colt.Timer timer1 = new cern.colt.Timer();
 	cern.colt.Timer timer2 = new cern.colt.Timer();
 
+   cern.jet.math.Functions F = cern.jet.math.Functions.functions;
+
 	long size = (((long)rows)*columns)*runs;
 
 	DoubleMatrix2D  matrix = null;
@@ -344,7 +346,8 @@
 	//if (kind.equals("sparse")) ((SparseDoubleMatrix2D)matrix).elements.hashCollisions = 0;
 	for (int i=0; i<runs; i++) {
 		timer1.start();
-		cern.colt.matrix.doublealgo.Transform.mult(matrix, 3);
+		//cern.colt.matrix.doublealgo.Transform.mult(matrix, 3);
+      matrix.assign(F.mult(3));
 		timer1.stop();
 	}
 	timer1.display();
@@ -366,7 +369,8 @@
 	//if (kind.equals("sparse")) ((SparseDoubleMatrix2D)matrix).elements.hashCollisions = 0;
 	for (int i=0; i<runs; i++) {
 		timer2.start();
-		cern.colt.matrix.doublealgo.Transform.mult(matrix,3);
+		// cern.colt.matrix.doublealgo.Transform.mult(matrix,3);
+      matrix.assign(F.mult(3));
 		timer2.stop();
 	}
 	timer2.display();