35 lines
793 B
Bash
35 lines
793 B
Bash
# Copyright 1999-2013 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Id$
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EAPI=4
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inherit autotools flag-o-matic
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DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
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HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
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SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz"
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LICENSE="MIT"
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SLOT="0"
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IUSE=""
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KEYWORDS="amd64 -x86"
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DEPEND="
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dev-libs/boost
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!sci-biology/allpaths
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sci-biology/vaal"
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RDEPEND=""
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src_prepare() {
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sed -i 's/-ggdb3//' configure.ac || die
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eautoreconf
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}
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src_install() {
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einstall || die
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# Provided by sci-biology/vaal
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for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
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rm "${D}/usr/bin/$i" || die
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done
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}
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