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gentoo-overlay/sci-chemistry/apbs/ChangeLog-2015

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# ChangeLog for sci-chemistry/apbs
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.81 2015/08/07 09:43:37 jlec Exp $
07 Aug 2015; Justin Lecher <jlec@gentoo.org> apbs-1.4.1-r2.ebuild:
Use DISTUTILS_SINGLE_IMPL, hopefully fixing, bug #556916
29 Jul 2015; Patrick Lauer <patrick@gentoo.org> metadata.xml:
Remove unneeded useflag description from metadata.xml
28 Jul 2015; Justin Lecher <jlec@gentoo.org> -apbs-1.2.1b-r4.ebuild,
-files/apbs-1.2.0-contrib.patch, -files/apbs-1.2.0-link.patch,
-files/apbs-1.2.1b-autoconf-2.64.patch, -files/apbs-1.2.1b-install-fix.patch,
-files/apbs-1.2.1b-multilib.patch, -files/apbs-1.2.1b-openmp.patch,
-files/apbs-1.2.1b-parallelbuild.patch, -files/apbs-1.2.1b-shared.patch,
-files/apbs-1.3-blas.patch, -files/apbs-1.3-contrib.patch,
-files/apbs-1.3-link.patch, -files/apbs-1.3-mainroutines.patch,
-files/apbs-1.3-openmp.patch, -files/apbs-1.3-python.patch,
-files/apbs-1.3-shared.patch, -files/apbs-1.3-zlib.patch,
-files/apbs-1.3/0001-autoconf-2.68.patch,
-files/apbs-1.3/0002-python-linking.patch,
-files/apbs-1.3/0003-apbs-1.3-pkg-config-file.patch,
-files/apbs-1.3/0004-apbs-1.3-system-zlib.patch,
-files/apbs-1.3/0005-apbs-1.3-linking.patch,
-files/apbs-1.3/0006-apbs-1.3-clean-targets.patch,
-files/apbs-1.3/0007-apbs-1.3-configure.patch,
-files/apbs-1.3/0008-apbs-1.3-broken-test.patch,
-files/apbs-1.3/0009-apbs-1.3-use-pkg-config-for-zlib-detection.patch,
-files/apbs-1.3/0010-apbs-1.3-use-OPENMP_CFLAGS-instead-of-OPENMP_LIBS.patch,
-files/apbs-1.3/0011-apbs-1.3-shared-linking.patch,
-files/apbs-1.3/0012-apbs-1.3-python-linking-correction.patch,
-files/apbs-1.3/0013-apbs-1.3-tools-installation.patch,
-files/apbs-1.3/0014-apbs-1.3-pythonlib-fix.patch,
-files/apbs-1.3/0015-apbs-1.3-pythonlib-fix.patch,
-files/apbs-1.3/0016-apbs-1.3-apbs.pc-in-AC_CONFIG_FILES.patch:
Drop old
04 Jul 2015; Mikle Kolyada <zlogene@gentoo.org> apbs-1.4.1-r2.ebuild:
amd64 stable wrt bug #534692
08 May 2015; Pacho Ramos <pacho@gentoo.org> apbs-1.4.1-r2.ebuild:
ppc stable, bug #534692
08 May 2015; Justin Lecher <jlec@gentoo.org> apbs-1.4.1-r2.ebuild,
metadata.xml:
Add iapbs USE to correctly trigger project internal dependencies
08 May 2015; Justin Lecher <jlec@gentoo.org> apbs-1.4.1-r2.ebuild:
Disable iAPBS to fix compilation problems, bug #547816
26 Apr 2015; Pacho Ramos <pacho@gentoo.org> apbs-1.4.1-r2.ebuild:
x86 stable wrt bug #534692
22 Jan 2015; Justin Lecher <jlec@gentoo.org> -apbs-1.3-r3.ebuild,
-apbs-1.4.1-r1.ebuild:
Drop old
04 Jan 2015; Justin Lecher <jlec@gentoo.org> apbs-1.4.1-r2.ebuild:
Make test use newly build libs
*apbs-1.4.1-r2 (30 Oct 2014)
30 Oct 2014; Justin Lecher <jlec@gentoo.org> +apbs-1.4.1-r2.ebuild:
Remove redundant python dir after installation
30 Oct 2014; Justin Lecher <jlec@gentoo.org> apbs-1.4.1-r1.ebuild:
Fix build problems, #527344
*apbs-1.4.1-r1 (28 Oct 2014)
28 Oct 2014; Justin Lecher <jlec@gentoo.org> -apbs-1.4.1.ebuild,
+apbs-1.4.1-r1.ebuild, files/apbs-1.4.1-manip.patch,
+files/apbs-1.4.1-python.patch:
Link python libs completely
24 Oct 2014; Justin Lecher <jlec@gentoo.org> apbs-1.4.1.ebuild:
Add missing requiered use
24 Oct 2014; Justin Lecher <jlec@gentoo.org> apbs-1.4.1.ebuild:
Add workaround for parallel build issue, #526210
21 Aug 2014; Justin Lecher <jlec@gentoo.org> apbs-1.4.1.ebuild,
+files/apbs-1.4.1-manip.patch, files/apbs-1.4.1-multilib.patch:
Fix build failure with USE=tools, #520126
*apbs-1.4.1 (15 Aug 2014)
15 Aug 2014; Justin Lecher <jlec@gentoo.org> +apbs-1.4.1.ebuild,
+files/apbs-1.4.1-multilib.patch, metadata.xml:
Version Bump
02 May 2013; Justin Lecher <jlec@gentoo.org> apbs-1.3-r3.ebuild:
Fix obsolete macros in automake-1.13
23 Apr 2013; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3-r3.ebuild:
Fix HOMEPAGE
27 Feb 2013; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3-r3.ebuild:
Add missing dep on virtual/pkgconfig
19 Feb 2013; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
metadata.xml:
Use tc-getPKG_CONFIG from toolchain-funcs.eclass instead of plain pkg-config
19 Oct 2012; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
-apbs-1.3.ebuild, -apbs-1.3-r1.ebuild, -apbs-1.3-r2.ebuild,
apbs-1.3-r3.ebuild:
Remove virtual/fortran and always call fortran-2_pkg_setup as intend by the
updated fortran-2.eclass
*apbs-1.3-r3 (19 Jul 2012)
19 Jul 2012; Justin Lecher <jlec@gentoo.org> +apbs-1.3-r3.ebuild,
+files/apbs-1.3/0016-apbs-1.3-apbs.pc-in-AC_CONFIG_FILES.patch:
Fix patching problem which lead to an empty pkg-config file, #425294
25 Apr 2012; Justin Lecher <jlec@gentoo.org> apbs-1.3-r2.ebuild:
Don't run libtoolize twice
05 Jan 2012; Justin Lecher <jlec@gentoo.org> apbs-1.3-r1.ebuild,
apbs-1.3-r2.ebuild:
Fix for file collitions
*apbs-1.3-r2 (04 Jan 2012)
04 Jan 2012; Justin Lecher <jlec@gentoo.org> +apbs-1.3-r2.ebuild,
+files/apbs-1.3/0001-autoconf-2.68.patch,
+files/apbs-1.3/0002-python-linking.patch,
+files/apbs-1.3/0003-apbs-1.3-pkg-config-file.patch,
+files/apbs-1.3/0004-apbs-1.3-system-zlib.patch,
+files/apbs-1.3/0005-apbs-1.3-linking.patch,
+files/apbs-1.3/0006-apbs-1.3-clean-targets.patch,
+files/apbs-1.3/0007-apbs-1.3-configure.patch,
+files/apbs-1.3/0008-apbs-1.3-broken-test.patch,
+files/apbs-1.3/0009-apbs-1.3-use-pkg-config-for-zlib-detection.patch,
+files/apbs-1.3/0010-apbs-1.3-use-OPENMP_CFLAGS-instead-of-OPENMP_LIBS.patch,
+files/apbs-1.3/0011-apbs-1.3-shared-linking.patch,
+files/apbs-1.3/0012-apbs-1.3-python-linking-correction.patch,
+files/apbs-1.3/0013-apbs-1.3-tools-installation.patch,
+files/apbs-1.3/0014-apbs-1.3-pythonlib-fix.patch,
+files/apbs-1.3/0015-apbs-1.3-pythonlib-fix.patch:
Rewrite build, rely on pkg-config when possible, move to
autotools-utils.eclass, handle static-libs correctly
13 Dec 2011; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3.ebuild, apbs-1.3-r1.ebuild:
Block sci-libs/gts with USE=tools because of file collision on
/usr/bin/smooth, #387689
20 Jul 2011; Pacho Ramos <pacho@gentoo.org> metadata.xml:
Drop maintainer due retirement, bug #105599
07 Jul 2011; Justin Lecher <jlec@gentoo.org> apbs-1.3-r1.ebuild:
Fix for atlas detection as blas implementation
04 Jul 2011; Justin Lecher <jlec@gentoo.org> apbs-1.3-r1.ebuild,
+files/apbs-1.3-blas.patch:
Fix for blas detection
02 Jul 2011; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3.ebuild, apbs-1.3-r1.ebuild, metadata.xml:
Use pkg-config to detect mmdb and lapack libs
21 Jun 2011; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3.ebuild, apbs-1.3-r1.ebuild:
Add dependency on virtual/fortran
21 Jun 2011; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3.ebuild, apbs-1.3-r1.ebuild:
Added fortran-2.eclass support
16 Apr 2011; Justin Lecher <jlec@gentoo.org> apbs-1.3.ebuild,
apbs-1.3-r1.ebuild:
Moved to new meta ebuild sci-libs/fetk
16 Dec 2010; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
apbs-1.3.ebuild, apbs-1.3-r1.ebuild:
Removal of fortran.eclass, #348851
*apbs-1.3-r1 (04 Nov 2010)
04 Nov 2010; Justin Lecher <jlec@gentoo.org>
files/apbs-1.2.1b-multilib.patch, +apbs-1.3-r1.ebuild,
+files/apbs-1.3-python.patch, files/apbs-1.3-shared.patch,
+files/apbs-1.3-zlib.patch:
Fix compilation of python module, fix support for zlib
01 Nov 2010; Justin Lecher <jlec@gentoo.org> apbs-1.3.ebuild,
+files/apbs-1.3-mainroutines.patch, files/apbs-1.3-shared.patch,
metadata.xml:
Include support for FETK
31 Oct 2010; Justin Lecher <jlec@gentoo.org> apbs-1.3.ebuild:
Make einfo on parallel python and mpi support
*apbs-1.3 (27 Oct 2010)
27 Oct 2010; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild,
+apbs-1.3.ebuild, +files/apbs-1.3-contrib.patch,
+files/apbs-1.3-link.patch, +files/apbs-1.3-openmp.patch,
+files/apbs-1.3-shared.patch:
Version Bump, tinker support removed
09 Jul 2010; Justin Lecher <jlec@gentoo.org> metadata.xml:
Update metadata.xml
09 Jul 2010; Justin Lecher <jlec@gentoo.org> -apbs-1.0.0-r1.ebuild,
-files/apbs-1.0.0-LDFLAGS.patch, -files/apbs-1.0.0-install-fix.patch,
-files/apbs-1.0.0-libmaloc-noinstall.patch,
-files/apbs-1.0.0-openmpi.patch, -apbs-1.2.1b-r3.ebuild:
Cleaned old after stabilization
09 Jul 2010; Christian Faulhammer <fauli@gentoo.org>
apbs-1.2.1b-r4.ebuild:
stable x86, bug 324613
27 Jun 2010; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r4.ebuild:
Force LC_NUMERIC to C during test, should fix problem with decimal
seperators
27 Jun 2010; <nixnut@gentoo.org> apbs-1.2.1b-r4.ebuild:
ppc stable #324613
26 Jun 2010; Christoph Mende <angelos@gentoo.org> apbs-1.2.1b-r4.ebuild:
Stable on amd64 wrt bug #324613
22 Jun 2010; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r3.ebuild,
apbs-1.2.1b-r4.ebuild:
Fixed test suite
17 Jun 2010; Justin Bronder <jsbronder@gentoo.org> apbs-1.0.0-r1.ebuild,
apbs-1.2.1b-r3.ebuild, apbs-1.2.1b-r4.ebuild:
Remove lam-mpi handling, see #324415.
*apbs-1.2.1b-r4 (15 Jun 2010)
15 Jun 2010; Kacper Kowalik <xarthisius@gentoo.org>
+apbs-1.2.1b-r4.ebuild, +files/apbs-1.2.1b-multilib.patch,
files/apbs-1.2.1b-openmp.patch, +files/apbs-1.2.1b-parallelbuild.patch,
+files/apbs-1.2.1b-shared.patch, metadata.xml:
Adding shared libs, fix parallel build, fix install paths on multilib
09 Jun 2010; Justin Lecher <jlec@gentoo.org> -apbs-1.2.0.ebuild,
-files/apbs-1.2.0-install-fix.patch, -apbs-1.2.1b.ebuild,
-apbs-1.2.1b-r1.ebuild:
removed old version which having problems with PYTHON ABIs stuff
12 May 2010; Justin Lecher (jlec) <jlec@j-schmitz.net>
apbs-1.2.1b-r3.ebuild:
Added missing fortran_pkg_setup
*apbs-1.2.1b-r3 (26 Apr 2010)
26 Apr 2010; Justin Lecher <jlec@gentoo.org> -apbs-1.2.1b-r2.ebuild,
+apbs-1.2.1b-r3.ebuild:
Wrong usage of python_get_sitedir forces the rev bump
25 Apr 2010; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r2.ebuild:
Python ABI fixes, #316165
30 Mar 2010; Justin Lecher <jlec@gentoo.org> apbs-1.2.1b-r2.ebuild,
metadata.xml:
Fix for USE="python -tool" situation, #311995
*apbs-1.2.1b-r2 (28 Mar 2010)
28 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org>
+apbs-1.2.1b-r2.ebuild, +files/apbs-1.2.1b-install-fix.patch,
+files/apbs-1.2.1b-openmp.patch:
Configure fixes, removed unnecessary installed files. Make tools optional
*apbs-1.2.1b-r1 (20 Feb 2010)
20 Feb 2010; Justin Lecher (jlec) <jlec@gentoo.org> apbs-1.2.1b.ebuild,
+apbs-1.2.1b-r1.ebuild:
Reverted last change into a new revision
18 Feb 2010; Justin Lecher (jlec) <jlec@gentoo.org> apbs-1.2.1b.ebuild:
EAPI=3, keyworded for {amd64,x86}-linux, made it EPREFIX aware
*apbs-1.2.1b (04 Dec 2009)
04 Dec 2009; Markus Dittrich <markusle@gentoo.org> +apbs-1.2.1b.ebuild,
+files/apbs-1.2.1b-autoconf-2.64.patch:
Version bump and fixed compilation with autoconf 2.64 (fixes bug
#294453 and #295537).
*apbs-1.2.0 (03 Nov 2009)
03 Nov 2009; Markus Dittrich <markusle@gentoo.org> -apbs-0.5.0.ebuild,
-apbs-0.5.1.ebuild, +apbs-1.2.0.ebuild, +files/apbs-1.2.0-contrib.patch,
+files/apbs-1.2.0-install-fix.patch, +files/apbs-1.2.0-link.patch,
-files/apbs-examples-gentoo.patch, -files/apbs-gcc4-gentoo.patch,
metadata.xml:
Version bump (fixes bug #262905) and removed old ebuilds. Currently
missing is opal support (needs keywording by ppc) as well as fetk
support. Thanks much to Justin Lecher for his ebuild.
06 May 2009; Markus Meier <maekke@gentoo.org> apbs-1.0.0-r1.ebuild:
amd64/x86 stable, bug #250903
05 Feb 2009; Jeremy Olexa <darkside@gentoo.org> apbs-0.5.0.ebuild,
apbs-0.5.1.ebuild, apbs-1.0.0-r1.ebuild:
(non maintainer commit) [QA] fix HOMEPAGE, bug 256488
*apbs-1.0.0-r1 (11 Oct 2008)
11 Oct 2008; Markus Dittrich <markusle@gentoo.org>
+files/apbs-1.0.0-LDFLAGS.patch,
files/apbs-1.0.0-install-fix.patch, -apbs-1.0.0.ebuild,
+apbs-1.0.0-r1.ebuild:
Version bump to pull in updated patch fixing bad install location
for docs (see bug #241316). Added patch for ignored LDFLAGS.
*apbs-1.0.0 (29 Apr 2008)
29 Apr 2008; Markus Dittrich <markusle@gentoo.org>
+files/apbs-1.0.0-install-fix.patch,
+files/apbs-1.0.0-libmaloc-noinstall.patch,
+files/apbs-1.0.0-openmpi.patch, +apbs-1.0.0.ebuild:
Version bump (fixes bug #219599). Changed license to BSD since
it most closely matches the apbs license.
23 Mar 2008; Markus Dittrich <markusle@gentoo.org> apbs-0.5.1.ebuild:
Changed to unversioned install location in /usr/share (see bug #213616).
12 Jan 2008; Markus Dittrich <markusle@gentoo.org> apbs-0.5.1.ebuild:
Fixed improper link path for libapbsblas.a (fixes bug #205310).
31 Jul 2007; Jeff Gardner <je_fro@gentoo.org> -apbs-0.4.0.ebuild:
Removing unused version/files.
18 Jul 2007; Jeff Gardner <je_fro@gentoo.org> ChangeLog:
Add apbs-0.5.1 which includes many bugfixes and new features.
24 Feb 2007; Jeff Gardner <je_fro@gentoo.org> apbs-0.5.0.ebuild:
Cleanup apbs-0.5.0.ebuild.
*apbs-0.5.0 (23 Feb 2007)
23 Feb 2007; Jeff Gardner <je_fro@gentoo.org> +apbs-0.5.0.ebuild:
Add apbs-0.5.0 with Big Thanks(tm) to Stephen Floor.
06 Jan 2007; Danny van Dyk <kugelfang@gentoo.org> -apbs-0.3.2.ebuild:
QA: Removed unused versions.
12 Oct 2006; Jeff Gardner <je_fro@gentoo.org>; apbs-0.4.0.ebuild:
Keyword ~amd64
20 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
(#148281) Change herd to sci-chemistry from sci.
16 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>; apbs-0.4.0.ebuild:
Keyword ~ppc.
07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; ChangeLog:
Update to my new email address.
31 May 2006; Donnie Berkholz <dberkholz@gentoo.org>; apbs-0.4.0.ebuild:
Fix crackrock SRC_URI, reported by Brian Harring.
23 May 2006; Markus Dittrich <markusle@gentoo.org>
+files/apbs-gcc4-gentoo.patch, apbs-0.4.0.ebuild:
Added patch to enable compilation with gcc-4.1.
27 Apr 2006; Alec Warner <antarus@gentoo.org> files/digest-apbs-0.3.2,
Manifest:
Fixing SHA256 digest, pass four
*apbs-0.4.0 (08 Mar 2006)
08 Mar 2006; Markus Dittrich <markusle@gentoo.org> +apbs-0.4.0.ebuild, +apbs-examples-gentoo.patch:
Version bump. Thanks to je_fro <je_fro@yahoo.com> for the ebuild
(see bug #124793).
13 Dec 2005; Markus Dittrich <markusle@gentoo.org> metadata.xml:
marked apbs-0.3.2.ebuild as ~x86
*apbs-0.3.2 (20 Oct 2005)
20 Oct 2005; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
+apbs-0.3.2.ebuild:
Initial import. Thanks to Markus Dittrich <markusle@gmail.com> for his work.