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gentoo-overlay/sci-biology/amos/amos-3.1.0-r1.ebuild

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734 B

# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=5
PYTHON_COMPAT=( python2_7 )
inherit eutils python-r1
DESCRIPTION="A Modular, Open-Source whole genome assembler"
HOMEPAGE="http://amos.sourceforge.net/"
SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
LICENSE="Artistic"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="qt4"
DEPEND="qt4? ( dev-qt/qtcore:4 )"
RDEPEND="${DEPEND}
dev-perl/DBI
dev-perl/Statistics-Descriptive
sci-biology/mummer"
MAKEOPTS+=" -j1"
src_prepare() {
epatch \
"${FILESDIR}"/${P}-gcc-4.7.patch \
"${FILESDIR}"/${P}-goBambus2.py-indent-and-cleanup.patch
}
src_install() {
default
python_replicate_script "${ED}"/usr/bin/goBambus2
}