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gentoo-overlay/sci-biology/primer3/primer3-2.3.7.ebuild

49 lines
1.1 KiB

# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=6
inherit eutils toolchain-funcs
DESCRIPTION="Primer Design for PCR reactions"
HOMEPAGE="http://primer3.sourceforge.net/"
SRC_URI="mirror://sourceforge/project/${PN}/${PN}/${PV}/${P}.tar.gz"
SLOT="0"
LICENSE="GPL-2"
IUSE=""
KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
DEPEND="dev-lang/perl"
RDEPEND=""
PATCHES=( "${FILESDIR}"/${PN}-2.3.4-buildsystem.patch )
src_prepare() {
default
if [[ ${CHOST} == *-darwin* ]]; then
sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile || die
fi
tc-export CC CXX AR RANLIB
}
src_compile() {
emake -C src
}
src_test () {
emake -C test | tee "${T}"/test.log
grep -q "\[FAILED\]" && die "test failed. See "${T}"/test.log"
}
src_install () {
dobin src/{long_seq_tm_test,ntdpal,oligotm,primer3_core}
dodoc src/release_notes.txt example
insinto /opt/primer3_config
doins -r src/primer3_config/* primer3*settings.txt
docinto html
dodoc primer3_manual.htm
}