20 lines
954 B
XML
20 lines
954 B
XML
<?xml version="1.0" encoding="UTF-8"?>
|
|
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
|
|
<pkgmetadata>
|
|
<maintainer type="project">
|
|
<email>sci-biology@gentoo.org</email>
|
|
<name>Gentoo Biology Project</name>
|
|
</maintainer>
|
|
<longdescription>
|
|
ARIADNE is a package of two programs, ariadne and prospero, that
|
|
compare protein sequences and profiles using the Smith-Waterman
|
|
algorithm, and assesses statistical significance using a new accurate
|
|
formula, described in Mott, 2000, "Accurate Formula for P-values of
|
|
gapped local sequence and profile alignments" J. Mol Biol. 300:649-659.
|
|
The sequence/profile comparison algorithms used in ARIADNE are
|
|
standard, and are probably not the fastest implementations available.
|
|
The novel part is the method for determining statistical significance,
|
|
which will give thresholds of significance that are accurate to within
|
|
5% 95% of the time.
|
|
</longdescription>
|
|
</pkgmetadata>
|