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159 lines
3.9 KiB
159 lines
3.9 KiB
# Copyright 1999-2021 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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# @ECLASS: emboss-r2.eclass
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# @MAINTAINER:
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# sci-biology@gentoo.org
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# ted.tanberry@gmail.com
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# @AUTHOR:
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# Original author: Author Olivier Fisette <ofisette@gmail.com>
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# Next gen author: Justin Lecher <jlec@gentoo.org>
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# Next gen author: Ted Tanberry <ted.tanberry@gmail.com>
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# @SUPPORTED_EAPIS: 7
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# @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons).
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# @DESCRIPTION:
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# The inheriting ebuild must provide EBO_DESCRIPTION before the inherit line.
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#
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# Example:
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#
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# EAPI=7
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#
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# EBO_DESCRIPTION="applications from the CBS group"
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#
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# inherit emboss-r2
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# @ECLASS-VARIABLE: EBO_DESCRIPTION
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# @PRE_INHERIT
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# @DEFAULT_UNSET
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# @DESCRIPTION:
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# Completes the generic description of the embassy module as follows:
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#
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# EMBOSS integrated version of ${EBO_DESCRIPTION}, e.g.
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#
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# "EMBOSS integrated version of applications from the CBS group"
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#
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# Defaults to the upstream name of the module.
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case ${EAPI:-0} in
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[0-6]) die "Unsupported EAPI=${EAPI:-0} (too old) for ${ECLASS}" ;;
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7) ;;
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*) die "Unsupported EAPI=${EAPI} (unknown) for ${ECLASS}" ;;
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esac
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EXPORT_FUNCTIONS src_prepare src_configure src_install
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if [[ ! ${_EMBOSS_R2_ECLASS} ]]; then
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_EMBOSS_R2_ECLASS=1
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inherit autotools flag-o-matic
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HOMEPAGE="http://emboss.sourceforge.net/"
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LICENSE="LGPL-2 GPL-2"
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SLOT="0"
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IUSE="mysql pdf png postgres X"
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RDEPEND="
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dev-libs/expat
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dev-libs/libpcre:3
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sci-libs/plplot:=
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sys-libs/zlib
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mysql? ( dev-db/mysql-connector-c:0= )
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pdf? ( media-libs/libharu:= )
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png? ( media-libs/gd:2=[png] )
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postgres? ( dev-db/postgresql:= )
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X? ( x11-libs/libXt )"
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if [[ ${PN} == embassy-* ]]; then
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EMBASSY_PACKAGE=yes
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# The EMBASSY package name, retrieved from the inheriting ebuild's name
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EN=${PN:8}
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# The full name and version of the EMBASSY package (excluding the Gentoo
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# revision number)
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EF="${EN^^}-${PV}"
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[[ ${EBO_DESCRIPTION} ]] || die "EBO_DESCRIPTION was not set before inheriting emboss-r2.eclass"
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DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}"
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SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PV}.tar.gz"
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RDEPEND+=" >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]"
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S="${WORKDIR}/${EF}"
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fi
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DEPEND="${RDEPEND}"
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# @ECLASS-VARIABLE: EBO_EAUTORECONF
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# @DEFAULT_UNSET
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# @DESCRIPTION:
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# If set, run eautoreconf from autotools.eclass after applying patches
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# in emboss-r2_src_prepare.
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# @FUNCTION: emboss-r2_src_prepare
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# @DESCRIPTION:
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# Does the following things
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#
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# 1. Renames configure.in to configure.ac, if possible
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# 2. Calls default_src_prepare (i.e. applies Gentoo and user patches)
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# 3. If EBO_EAUTORECONF is set, run eautoreconf
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emboss-r2_src_prepare() {
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if [[ -e configure.in ]]; then
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mv configure.{in,ac} || die
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fi
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default
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[[ ${EBO_EAUTORECONF} ]] && eautoreconf
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}
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# @FUNCTION: emboss-r2_src_configure
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# @DESCRIPTION:
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# runs econf with following options.
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#
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# --enable-shared
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# --disable-static
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# $(use_with X x)
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# $(use_with png pngdriver)
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# $(use_with pdf hpdf)
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# $(use_with mysql mysql)
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# $(use_with postgres postgresql)
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# --enable-large
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# --without-java
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# --enable-systemlibs
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#
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# can be appended to like econf, e.g.
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# emboss-r2_src_configure --enable-foo
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emboss-r2_src_configure() {
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local myconf=(
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--enable-shared
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--disable-static
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$(use_with X x)
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$(use_with png pngdriver "${EPREFIX}"/usr)
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$(use_with pdf hpdf "${EPREFIX}"/usr)
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$(use_with mysql mysql "${EPREFIX}"/usr/bin/mysql_config)
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$(use_with postgres postgresql "${EPREFIX}"/usr/bin/pg_config)
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--enable-large
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--without-java
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--enable-systemlibs
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)
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[[ ${EMBASSY_PACKAGE} == yes ]] && \
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append-cppflags "-I${EPREFIX}/usr/include/emboss"
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econf "${myconf[@]}" "$@"
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}
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# @FUNCTION: emboss-r2_src_install
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# @DESCRIPTION:
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# Installs the package into the staging area and removes unnecessary .la files.
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emboss-r2_src_install() {
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default
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# delete .la files
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find "${ED}" -name '*.la' -delete || die
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}
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fi
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