120 lines
3 KiB
Bash
120 lines
3 KiB
Bash
# Copyright 1999-2014 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.5.0.3-r2.ebuild,v 1.5 2014/05/01 12:18:46 jlec Exp $
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EAPI=5
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PYTHON_COMPAT=( python2_7 )
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PYTHON_REQ_USE="tk"
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inherit distutils-r1 fdo-mime prefix versionator
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DESCRIPTION="A Python-extensible molecular graphics system"
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HOMEPAGE="http://www.pymol.org/"
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SRC_URI="
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http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz
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http://dev.gentoo.org/~jlec/distfiles/${PN}-icons.tar.xz"
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LICENSE="PSF-2.2"
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SLOT="0"
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KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
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IUSE="apbs numpy vmd web"
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DEPEND="
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dev-python/numpy[${PYTHON_USEDEP}]
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dev-python/pmw[${PYTHON_USEDEP}]
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media-libs/freetype:2
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media-libs/glew
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media-libs/libpng
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media-video/mpeg-tools
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sys-libs/zlib
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media-libs/freeglut
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apbs? (
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sci-chemistry/apbs
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sci-chemistry/pdb2pqr
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sci-chemistry/pymol-apbs-plugin
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)
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web? ( !dev-python/webpy )"
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RDEPEND="${DEPEND}"
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python_prepare_all() {
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local PATCHES=(
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"${FILESDIR}"/${PN}-1.5.0.1-setup.py.patch
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"${FILESDIR}"/${PN}-1.5.0.1-data-path.patch
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"${FILESDIR}"/${PN}-1.5.0.1-flags.patch
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"${FILESDIR}"/${P}-prefix.patch
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)
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use web || PATCHES+=( "${FILESDIR}"/${P}-web.patch )
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use vmd && PATCHES+=( "${FILESDIR}"/${PN}-1.5.0.1-vmd.patch )
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if use numpy; then
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sed \
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-e '/PYMOL_NUMPY/s:^#::g' \
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-i setup.py || die
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fi
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rm ./modules/pmg_tk/startup/apbs_tools.py || die
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python_export python2_7 EPYTHON PYTHON_SITEDIR
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echo "site_packages = \'$(python_get_sitedir)\'" > setup3.py || die
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sed \
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-e "s:/opt/local:${EPREFIX}/usr:g" \
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-e '/ext_comp_args/s:\[.*\]:[]:g' \
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-i setup.py || die
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distutils-r1_python_prepare_all
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eprefixify setup.py
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}
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python_install_all() {
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distutils-r1_python_install_all
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python_export python2_7 EPYTHON
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# These environment variables should not go in the wrapper script, or else
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# it will be impossible to use the PyMOL libraries from Python.
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cat >> "${T}"/20pymol <<- EOF
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PYMOL_PATH="$(python_get_sitedir)/${PN}"
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PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
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PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
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EOF
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doenvd "${T}"/20pymol
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cat >> "${T}"/pymol <<- EOF
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#!/bin/sh
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${EPYTHON} -O \${PYMOL_PATH}/__init__.py -q \$*
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EOF
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dobin "${T}"/pymol
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insinto /usr/share/pymol
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doins -r test data scripts
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insinto /usr/share/pymol/examples
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doins -r examples
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dodoc DEVELOPERS README
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doicon "${WORKDIR}"/${PN}.{xpm,png}
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make_desktop_entry pymol PyMol ${PN} "Graphics;Education;Science;Chemistry" "MimeType=chemical/x-pdb;"
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}
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pkg_postinst() {
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elog "\t USE=shaders was removed,"
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elog "please use pymol config settings (~/.pymolrc)"
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elog "\t set use_shaders, 1"
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elog "in case of crashes, please deactivate this experimental feature by setting"
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elog "\t set use_shaders, 0"
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elog "\t set sphere_mode, 0"
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fdo-mime_desktop_database_update
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fdo-mime_mime_database_update
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}
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pkg_postrm() {
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fdo-mime_desktop_database_update
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fdo-mime_mime_database_update
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}
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