103 lines
2.6 KiB
Bash
103 lines
2.6 KiB
Bash
# Copyright 1999-2014 Gentoo Foundation
|
|
# Distributed under the terms of the GNU General Public License v2
|
|
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.7.0.4-r1.ebuild,v 1.2 2014/05/01 12:18:46 jlec Exp $
|
|
|
|
EAPI=5
|
|
|
|
PYTHON_COMPAT=( python2_7 )
|
|
PYTHON_REQ_USE="tk"
|
|
|
|
inherit distutils-r1 fdo-mime versionator
|
|
|
|
DESCRIPTION="A Python-extensible molecular graphics system"
|
|
HOMEPAGE="http://www.pymol.org/"
|
|
SRC_URI="
|
|
http://dev.gentoo.org/~jlec/distfiles/${PN}-1.7.0.0.png.xz
|
|
http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz
|
|
"
|
|
# mirror://sourceforge/project/${PN}/${PN}/$(get_version_component_range 1-2)/${PN}-v${PV}.tar.bz2
|
|
|
|
LICENSE="PSF-2.2"
|
|
SLOT="0"
|
|
KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
|
|
IUSE="apbs web"
|
|
|
|
DEPEND="
|
|
dev-python/numpy[${PYTHON_USEDEP}]
|
|
dev-python/pmw[${PYTHON_USEDEP}]
|
|
dev-python/pyopengl[${PYTHON_USEDEP}]
|
|
media-libs/freetype:2
|
|
media-libs/glew
|
|
media-libs/libpng
|
|
media-video/mpeg-tools
|
|
sys-libs/zlib
|
|
media-libs/freeglut
|
|
apbs? (
|
|
sci-chemistry/apbs
|
|
sci-chemistry/pdb2pqr
|
|
sci-chemistry/pymol-apbs-plugin[${PYTHON_USEDEP}]
|
|
)
|
|
web? ( !dev-python/webpy[${PYTHON_USEDEP}] )"
|
|
RDEPEND="${DEPEND}"
|
|
|
|
S="${WORKDIR}"/${P}/${PN}
|
|
|
|
PATCHES=(
|
|
"${FILESDIR}"/${P}-fix-broken-label-scaling-on-Linux.patch
|
|
)
|
|
|
|
python_prepare_all() {
|
|
sed \
|
|
-e "s:\"/usr:\"${EPREFIX}/usr:g" \
|
|
-e "/ext_comp_args/s:=\[.*\]$:= \[\]:g" \
|
|
-e "/import/s:argparse:argparseX:g" \
|
|
-i setup.py || die
|
|
|
|
rm ./modules/pmg_tk/startup/apbs_tools.py || die
|
|
|
|
sed \
|
|
-e "s:/opt/local:${EPREFIX}/usr:g" \
|
|
-e '/ext_comp_args/s:\[.*\]:[]:g' \
|
|
-i setup.py || die
|
|
|
|
distutils-r1_python_prepare_all
|
|
}
|
|
|
|
python_install() {
|
|
distutils-r1_python_install --pymol-path="${EPREFIX}/usr/share/pymol"
|
|
}
|
|
|
|
python_install_all() {
|
|
distutils-r1_python_install_all
|
|
|
|
python_export python2_7 EPYTHON
|
|
|
|
# These environment variables should not go in the wrapper script, or else
|
|
# it will be impossible to use the PyMOL libraries from Python.
|
|
cat >> "${T}"/20pymol <<- EOF
|
|
PYMOL_PATH="$(python_get_sitedir)/${PN}"
|
|
PYMOL_DATA="${EPREFIX}/usr/share/pymol/data"
|
|
PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts"
|
|
EOF
|
|
|
|
doenvd "${T}"/20pymol
|
|
|
|
newicon "${WORKDIR}"/${PN}-1.7.0.0.png ${PN}.png
|
|
make_desktop_entry pymol PyMol ${PN} "Graphics;Education;Science;Chemistry" "MimeType=chemical/x-pdb;"
|
|
|
|
if ! use web; then
|
|
rm -rf "${D}/$(python_get_sitedir)/web" || die
|
|
fi
|
|
|
|
rm -f "${ED}"/usr/share/${PN}/LICENSE || die
|
|
}
|
|
|
|
pkg_postinst() {
|
|
fdo-mime_desktop_database_update
|
|
fdo-mime_mime_database_update
|
|
}
|
|
|
|
pkg_postrm() {
|
|
fdo-mime_desktop_database_update
|
|
fdo-mime_mime_database_update
|
|
}
|