40 lines
1,023 B
Bash
40 lines
1,023 B
Bash
# Copyright 1999-2013 Gentoo Foundation
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# Distributed under the terms of the GNU General Public License v2
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# $Header: /var/cvsroot/gentoo-x86/sci-biology/ariadne/ariadne-1.3-r2.ebuild,v 1.3 2013/04/11 18:42:50 ulm Exp $
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EAPI=4
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inherit eutils toolchain-funcs
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DESCRIPTION="Protein sequences and profiles comparison"
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HOMEPAGE="http://www.well.ox.ac.uk/ariadne/"
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SRC_URI="http://www.well.ox.ac.uk/${PN}/${P}.tar.Z"
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LICENSE="ARIADNE"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="static-libs"
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DEPEND=">=sci-biology/ncbi-tools-0.20041020-r1"
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RDEPEND="${DEPEND}"
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S=${WORKDIR}/SRC-${PV}
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src_prepare() {
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epatch "${FILESDIR}"/${P}-gcc4.patch \
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"${FILESDIR}"/${P}-implicits.patch
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sed -i -e "s/\$(CFLAGS)/\$(LDFLAGS) &/" Makefile || die #359045
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sed -e "s/blosum62/BLOSUM62/" -i prospero.c || die
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}
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src_compile() {
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emake CC="$(tc-getCC)" OPTIMISE="${CFLAGS}"
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}
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src_install() {
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dobin Linux/{ariadne,prospero}
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use static-libs && dolib.a Linux/libseq.a
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insinto /usr/include/${PN}
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doins Include/*.h || die
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dodoc README || die
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}
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