gentoo-overlay/sci-biology/ncbi-tools/files/ncbi-tools-extra_vib.patch

--- ncbi-20061015/make/makedis.csh	2006-09-14 17:37:03.000000000 +0200
+++ ncbi/make/makedis.csh	2007-03-07 21:00:36.090836460 +0100
@@ -485,6 +485,34 @@
 
 set net_stat = $status
 
+if ( $net_stat == 0 ) then
+	# Compile additional tools, usually hidden
+	if ( ! $?EXTRA_VIB ) then
+		set EXTRA_VIB = ( asn2all )
+	endif
+	
+	if ("$?NCBI_MT_OTHERLIBS" == "1") then
+		set CMD='make $MFLG -f makenet.unx \
+			CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1 $OGL_INCLUDE\" \
+			LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \
+			AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" RAN=\"$NCBI_RANLIB\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \
+			THREAD_OBJ=$NCBI_THREAD_OBJ \
+			THREAD_OTHERLIBS=\"$NCBI_MT_OTHERLIBS\" \
+			NETENTREZVERSION=\"$NETENTREZVERSION\" $NET_VIB $EXTRA_VIB'
+	else
+		set CMD='make $MFLG -f makenet.unx \
+			CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1 $OGL_INCLUDE\" \
+			LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \
+			AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" RAN=\"$NCBI_RANLIB\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \
+			NETENTREZVERSION=\"$NETENTREZVERSION\" $NET_VIB $EXTRA_VIB'
+	endif
+	eval echo $CMD
+	eval echo $CMD | sh
+	
+	set net_stat = $status
+	
+endif
+
 if ($make_stat != 0 || $demo_stat != 0 || $threaded_demo_stat != 0 || $net_stat != 0) then
    echo FAILURE primary make status = $make_stat, demo = $demo_stat, threaded_demo = $threaded_demo_stat, net = $net_stat
 	cat <<EOF