gentoo-overlay/sci-chemistry/autodock_vina/files/1.1.2-gentoo.patch

 build/linux/debug/Makefile   |    2 +-
 build/linux/release/Makefile |    2 +-
 build/makefile_common        |   14 +++++++-------
 3 files changed, 9 insertions(+), 9 deletions(-)

diff --git a/build/linux/debug/Makefile b/build/linux/debug/Makefile
index 6a41cfc..8097fb9 100644
--- a/build/linux/debug/Makefile
+++ b/build/linux/debug/Makefile
@@ -1,7 +1,7 @@
 BASE=/usr/local
 BOOST_VERSION=1_41
 BOOST_INCLUDE = $(BASE)/include
-C_PLATFORM=-static -pthread
+C_PLATFORM=-pthread
 GPP=/usr/local/bin/g++
 C_OPTIONS= -g
 BOOST_LIB_VERSION=
diff --git a/build/linux/release/Makefile b/build/linux/release/Makefile
index 1de1063..ded8133 100644
--- a/build/linux/release/Makefile
+++ b/build/linux/release/Makefile
@@ -1,7 +1,7 @@
 BASE=/usr/local
 BOOST_VERSION=1_41
 BOOST_INCLUDE = $(BASE)/include
-C_PLATFORM=-static -pthread
+C_PLATFORM=-pthread
 GPP=/usr/local/bin/g++
 C_OPTIONS= -O3 -DNDEBUG
 BOOST_LIB_VERSION=
diff --git a/build/makefile_common b/build/makefile_common
index a940329..96336e8 100644
--- a/build/makefile_common
+++ b/build/makefile_common
@@ -2,29 +2,29 @@ LIBOBJ = cache.o coords.o current_weights.o everything.o grid.o szv_grid.o manif
 MAINOBJ = main.o
 SPLITOBJ = split.o
 
-INCFLAGS = -I $(BOOST_INCLUDE)
+INCFLAGS = -I$(BOOST_INCLUDE)
 
 # -pedantic fails on Mac with Boost 1.41 (syntax problems in their headers)
 #CC = ${GPP} ${C_PLATFORM} -ansi -pedantic -Wno-long-long ${C_OPTIONS} $(INCFLAGS)
 CC = ${GPP} ${C_PLATFORM} -ansi -Wno-long-long ${C_OPTIONS} $(INCFLAGS)
 
-LDFLAGS = -L$(BASE)/lib -L.
+LDFLAGS += -L.
 
-LIBS = -l boost_system${BOOST_LIB_VERSION} -l boost_thread${BOOST_LIB_VERSION} -l boost_serialization${BOOST_LIB_VERSION} -l boost_filesystem${BOOST_LIB_VERSION} -l boost_program_options${BOOST_LIB_VERSION}#-l pthread
+LIBS = -lboost_system -lboost_thread -lboost_serialization -lboost_filesystem -lboost_program_options -lpthread
 
 .SUFFIXES: .cpp .o
 
 %.o : ../../../src/lib/%.cpp 
-	$(CC) $(CFLAGS) -o $@ -c $< 
+	$(CC) $(CXXFLAGS) -o $@ -c $< 
 
 %.o : ../../../src/design/%.cpp 
-	$(CC) $(CFLAGS) -I ../../../src/lib -o $@ -c $< 
+	$(CC) $(CXXFLAGS) -I ../../../src/lib -o $@ -c $< 
 	
 %.o : ../../../src/main/%.cpp 
-	$(CC) $(CFLAGS) -I ../../../src/lib -o $@ -c $< 
+	$(CC) $(CXXFLAGS) -I ../../../src/lib -o $@ -c $< 
 
 %.o : ../../../src/split/%.cpp 
-	$(CC) $(CFLAGS) -I ../../../src/lib -o $@ -c $< 
+	$(CC) $(CXXFLAGS) -I ../../../src/lib -o $@ -c $< 
 
 all: vina vina_split