gentoo-overlay/sci-biology/ncbi-tools/files/ncbi-tools-lop.patch

--- platform/linux-power.ncbi.mk.bak	2005-08-04 22:45:13.000000000 -0500
+++ platform/linux-power.ncbi.mk	2005-08-04 22:45:35.000000000 -0500
@@ -9,10 +9,10 @@
 #it appears the flags above do not work anymore with newer libc,
 #the new flags should work. Dima. 08/23/01
 NCBI_AR=ar
-NCBI_CC = xlc_r -w -qcpluscmt -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE
+NCBI_CC = gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE
 NCBI_CFLAGS1 = -c 
 NCBI_LDFLAGS1 = -O3 -D_LARGE_FILES 
-NCBI_OPTFLAG = -O3 -qmaxmem=-1 -D_LARGE_FILE
+NCBI_OPTFLAG = -O3  -D_LARGE_FILE
 NCBI_BIN_MASTER = /vol/stcfs/rchen/LoP/ncbi/bin
 NCBI_BIN_COPY = /vol/stcfs/rchen/LoP/ncbi/bin
 NCBI_INCDIR = /vol/stcfs/rchen/LoP/ncbi/include