gentoo-overlay/sci-chemistry/clashlist/clashlist-3.17-r1.ebuild

# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/clashlist/clashlist-3.17-r1.ebuild,v 1.1 2012/06/07 15:08:22 jlec Exp $

EAPI=4

DESCRIPTION="Build lists of van der Waals clashes from an input PDB file"
HOMEPAGE="http://kinemage.biochem.duke.edu/software/index.php"
SRC_URI="mirror://gentoo/molprobity-${PV}.tgz"

SLOT="0"
LICENSE="richardson"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

RDEPEND="
	>=sci-chemistry/cluster-1.3.081231-r1
	sci-chemistry/probe"
DEPEND="${RDEPEND}"

S="${WORKDIR}"

src_prepare() {
	sed \
		-e 's: cluster : molprobity-cluster :g' \
		-i molprobity3/bin/clashlist || die
}

src_install() {
	dobin molprobity3/bin/clashlist
}