|
|
|
# Copyright 1999-2015 Gentoo Foundation
|
|
|
|
# Distributed under the terms of the GNU General Public License v2
|
|
|
|
# $Id$
|
|
|
|
|
|
|
|
EAPI=5
|
|
|
|
|
|
|
|
PYTHON_COMPAT=( python2_7 python3_4 )
|
|
|
|
PYTHON_REQ_USE="threads(+)"
|
|
|
|
|
|
|
|
DOC_PV=0.15.1
|
|
|
|
|
|
|
|
inherit eutils fortran-2 distutils-r1 flag-o-matic multilib toolchain-funcs
|
|
|
|
|
|
|
|
DESCRIPTION="Scientific algorithms library for Python"
|
|
|
|
HOMEPAGE="http://www.scipy.org/"
|
|
|
|
SRC_URI="
|
|
|
|
mirror://sourceforge/${PN}/${P}.tar.gz
|
|
|
|
doc? (
|
|
|
|
http://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${PV}.zip -> ${PN}-${DOC_PV}-html.zip
|
|
|
|
http://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-ref-${PV}.pdf -> ${PN}-${DOC_PV}-ref.pdf
|
|
|
|
)"
|
|
|
|
|
|
|
|
LICENSE="BSD LGPL-2"
|
|
|
|
SLOT="0"
|
|
|
|
IUSE="doc sparse test"
|
|
|
|
KEYWORDS="amd64 ~arm ppc ppc64 x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos"
|
|
|
|
|
|
|
|
CDEPEND="
|
|
|
|
dev-python/numpy[lapack,${PYTHON_USEDEP}]
|
|
|
|
sci-libs/arpack:0=
|
|
|
|
virtual/cblas
|
|
|
|
virtual/lapack
|
|
|
|
sparse? ( sci-libs/umfpack:0= )"
|
|
|
|
DEPEND="${CDEPEND}
|
|
|
|
dev-lang/swig
|
|
|
|
>=dev-python/cython-0.19.1[${PYTHON_USEDEP}]
|
|
|
|
virtual/pkgconfig
|
|
|
|
doc? ( app-arch/unzip )
|
|
|
|
test? ( dev-python/nose[${PYTHON_USEDEP}] )
|
|
|
|
"
|
|
|
|
|
|
|
|
RDEPEND="${CDEPEND}
|
|
|
|
dev-python/pillow[${PYTHON_USEDEP}]"
|
|
|
|
|
|
|
|
DOCS=( HACKING.rst.txt THANKS.txt )
|
|
|
|
|
|
|
|
DISTUTILS_IN_SOURCE_BUILD=1
|
|
|
|
|
|
|
|
src_unpack() {
|
|
|
|
unpack ${P}.tar.gz
|
|
|
|
if use doc; then
|
|
|
|
unzip -qo "${DISTDIR}"/${PN}-${DOC_PV}-html.zip -d html || die
|
|
|
|
fi
|
|
|
|
}
|
|
|
|
|
|
|
|
pc_incdir() {
|
|
|
|
$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
|
|
|
|
sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
|
|
|
|
}
|
|
|
|
|
|
|
|
pc_libdir() {
|
|
|
|
$(tc-getPKG_CONFIG) --libs-only-L $@ | \
|
|
|
|
sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
|
|
|
|
}
|
|
|
|
|
|
|
|
pc_libs() {
|
|
|
|
$(tc-getPKG_CONFIG) --libs-only-l $@ | \
|
|
|
|
sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
|
|
|
|
-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
|
|
|
|
| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
|
|
|
|
}
|
|
|
|
|
|
|
|
python_prepare_all() {
|
|
|
|
# scipy automatically detects libraries by default
|
|
|
|
export {FFTW,FFTW3,UMFPACK}=None
|
|
|
|
use sparse && unset UMFPACK
|
|
|
|
# the missing symbols are in -lpythonX.Y, but since the version can
|
|
|
|
# differ, we just introduce the same scaryness as on Linux/ELF
|
|
|
|
[[ ${CHOST} == *-darwin* ]] \
|
|
|
|
&& append-ldflags -bundle "-undefined dynamic_lookup" \
|
|
|
|
|| append-ldflags -shared
|
|
|
|
[[ -z ${FC} ]] && export FC="$(tc-getFC)"
|
|
|
|
# hack to force F77 to be FC until bug #278772 is fixed
|
|
|
|
[[ -z ${F77} ]] && export F77="$(tc-getFC)"
|
|
|
|
export F90="${FC}"
|
|
|
|
export SCIPY_FCONFIG="config_fc --noopt --noarch"
|
|
|
|
append-fflags -fPIC
|
|
|
|
|
|
|
|
local libdir="${EPREFIX}"/usr/$(get_libdir)
|
|
|
|
cat >> site.cfg <<-EOF
|
|
|
|
[blas]
|
|
|
|
include_dirs = $(pc_incdir cblas)
|
|
|
|
library_dirs = $(pc_libdir cblas blas):${libdir}
|
|
|
|
blas_libs = $(pc_libs cblas blas)
|
|
|
|
[lapack]
|
|
|
|
library_dirs = $(pc_libdir lapack):${libdir}
|
|
|
|
lapack_libs = $(pc_libs lapack)
|
|
|
|
EOF
|
|
|
|
|
|
|
|
# Drop hashes to force rebuild of cython based .c code
|
|
|
|
rm cythonize.dat || die
|
|
|
|
|
|
|
|
local PATCHES=(
|
|
|
|
"${FILESDIR}"/${PN}-0.12.0-blitz.patch
|
|
|
|
"${FILESDIR}"/${PN}-0.12.0-restore-sys-argv.patch
|
|
|
|
)
|
|
|
|
distutils-r1_python_prepare_all
|
|
|
|
}
|
|
|
|
|
|
|
|
python_compile() {
|
|
|
|
${EPYTHON} tools/cythonize.py || die
|
|
|
|
distutils-r1_python_compile ${SCIPY_FCONFIG}
|
|
|
|
}
|
|
|
|
|
|
|
|
python_test() {
|
|
|
|
# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
|
|
|
|
distutils_install_for_testing ${SCIPY_FCONFIG}
|
|
|
|
cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
|
|
|
|
"${EPYTHON}" -c "
|
|
|
|
import scipy, sys
|
|
|
|
r = scipy.test('fast',verbose=2)
|
|
|
|
sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}"
|
|
|
|
}
|
|
|
|
|
|
|
|
python_install_all() {
|
|
|
|
if use doc; then
|
|
|
|
dodoc "${DISTDIR}"/${PN}*pdf
|
|
|
|
docinto html
|
|
|
|
dodoc -r "${WORKDIR}"/html/.
|
|
|
|
fi
|
|
|
|
distutils-r1_python_install_all
|
|
|
|
}
|
|
|
|
|
|
|
|
python_install() {
|
|
|
|
distutils-r1_python_install ${SCIPY_FCONFIG}
|
|
|
|
}
|
|
|
|
|
|
|
|
pkg_postinst() {
|
|
|
|
elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
|
|
|
|
elog "to your prefered image viewer. Example:"
|
|
|
|
elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
|
|
|
|
}
|